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exon-mzml

Exon MzML

by Trent Hauck

40 releases (19 breaking)

0.24.1 May 30, 2024
0.23.0 May 27, 2024
0.15.0 Mar 27, 2024
0.5.5 Dec 18, 2023

#1713 in Parser implementations

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1,749 downloads per month
Used in exon

Apache-2.0

82KB
1.5K SLoC

Exon

Exon is an execution engine designed to work with bioinformatics data. It features:

  • SQL based access to bioinformatics data -- general DML and some DDL support
  • Support for many file formats from bioinformatics, proteomics, and others
  • Local filesystem and object storage support
  • Arrow FFI primitives for multi-language support

Installation

Exon is available via crates.io. To install, run:

cargo add exon

Documentation

  • Rust documentation is available here.
  • General documentation is available here.

Benchmarks

Please see the benchmarks README for more information.

Dependencies

~64MB
~1.5M SLoC